Stem-loop sma-mir-8443

Accession

MI0027238

Description

Schistosoma mansoni sma-mir-8443 precursor miRNA

Sequence

uagucauguucagaACUUUGCAUUCAUAUUGGUuuuuguacaaguaaggcgaaugacgaacuuaccgcauuuacuagACACAUCCAAUUAUAAUGCAuucucuuaccauuucuu
.((..(((...(((....((((((...(((((....(((.(.(((((((((..............))).)))))).))))...)))))...))))))...)))...)))..)).

Structure

u  uc   uuc   ACUU      CAU     Uuuu   a a      -   aaugac 
 ag  aug   aga    UGCAUU   AUUGG    ugu c aguaag gcg      g
 ||  |||   |||    ||||||   |||||    ||| | |||||| |||       
 uc  uac   ucu    ACGUAA   UAACC    ACA g ucauuu cgc      a
u  uu   cau   -cuu      UAU     -UAC   - a      a   cauuca 

Annotation confidence Not enough data

Genome context

Chr_4: 32015345-32015458 [-]

Mature sma-miR-8443-5p

• Accession: MIMAT0033594
• Description: Schistosoma mansoni sma-miR-8443-5p mature miRNA
• Sequence: 15 - ACUUUGCAUUCAUAUUGGU - 33
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8443-3p

• Accession: MIMAT0033595
• Description: Schistosoma mansoni sma-miR-8443-3p mature miRNA
• Sequence: 78 - ACACAUCCAAUUAUAAUGCA - 97
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402