Stem-loop sma-mir-8444

Accession

MI0027239

Description

Schistosoma mansoni sma-mir-8444 precursor miRNA

Sequence

guacugggaagauauauugaaauugauuaucguguaguaAUAAGUAUAAUUAAUCGUAguuauaucuuaagagauuuaaaCAACGCUGUUAAUAAUAAUuuauuguucaaagaacugcacaacaucgauuuugaaguuuugcccugaaa
.....((((((((...(((((((((((....((((((((((((((((.(((((((((.(((..((((....))))...))).)))..)))))).)).))))))).........)))))))...))))))))))).))))).))).....

Structure

guacu   -     aua           uauc       ---------       -  A      --   A   -au    u 
     ggg aagau   uugaaauugau    guguagu         aAUAAGU AU AUUAAU  CGU guu   aucu a
     ||| |||||   |||||||||||    |||||||         ||||||| || ||||||  ||| |||   ||||  
     ccc uuuug   aguuuuagcua    cacguca         uuauuUA UA UAAUUG  GCA Caa   uaga a
aaagu   g     --a           -caa       agaaacuug       A  A      UC   A   auu    g 

Annotation confidence Not enough data

Genome context

Chr_4: 457467-457615 [+]

Mature sma-miR-8444-5p

• Accession: MIMAT0033596
• Description: Schistosoma mansoni sma-miR-8444-5p mature miRNA
• Sequence: 40 - AUAAGUAUAAUUAAUCGUA - 58
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8444-3p

• Accession: MIMAT0033597
• Description: Schistosoma mansoni sma-miR-8444-3p mature miRNA
• Sequence: 81 - CAACGCUGUUAAUAAUAAU - 99
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402