Stem-loop sma-mir-8467

Accession

MI0027268

Description

Schistosoma mansoni sma-mir-8467 precursor miRNA

Sequence

augucaccagcaauuuaaaaucgcuacauuuuguucgguauACGAUAAAUAUCAGACCCAuauaaagccguacauugaucaaacaagcagucaaaaaUGGGAUGAUUACUCAUUUAAauuguauuggaacaacugguaugga
.....(((((....................((((((.(.(((((((((((((((..(((((.....((.((...(((......))))).)).....))))).)))).....)))))..))))))).))))))))))).....

Structure

auguc     caauuuaaaaucgcuacauu      g u      --     -----    GA     auaaa  c  aca   au 
     accag                    uuguuc g auACGA  UAAAU     AUCA  CCCAu     gc gu   uug  c
     |||||                    |||||| | ||||||  |||||     ||||  |||||     || ||   |||   
     ugguc                    aacaag u uauguu  AUUUA     UAGU  GGGUa     ug cg   aac  a
aggua     --------------------      g -      aA     CUCAU    -A     aaaac  a  ---   aa 

Annotation confidence Not enough data

Genome context

Chr_W: 27605556-27605697 [+]

Mature sma-miR-8467-5p

• Accession: MIMAT0033653
• Description: Schistosoma mansoni sma-miR-8467-5p mature miRNA
• Sequence: 42 - ACGAUAAAUAUCAGACCCA - 60
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8467-3p

• Accession: MIMAT0033654
• Description: Schistosoma mansoni sma-miR-8467-3p mature miRNA
• Sequence: 98 - UGGGAUGAUUACUCAUUUAA - 117
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402