Stem-loop sma-mir-8472

Accession

MI0027273

Description

Schistosoma mansoni sma-mir-8472 precursor miRNA

Sequence

uaaaugcuuucuacuuuuguuuauuuuauuucggugucgggucauuUUUAGAAGAUAGUAAUUAAuaacuugugUAAUUAUCACAUUCUACUAugauacuuugauauugccuuuauaauaaauuuucuaaaugaacgcuugau
.....((.(((.......(((((((.((...((((((((((((((...(((((....(((((((..........)))))))....)))))..)))))...)))))))))....)).))))))).........))).)).....

Structure

uaaau  u   --uacuuuu       u  -uuu         ---     uUU     GAUA       Auaa 
     gc uuc         guuuauu ua    cggugucgg   gucau   UAGAA    GUAAUUA    c
     || |||         ||||||| ||    |||||||||   |||||   |||||    |||||||     
     cg aag         uaaauaa au    guuauaguu   uaguA   AUCUU    UAUUAAU    u
uaguu  c   uaaaucuuu       u  uucc         uca     -UC     ACAC       gugu 

Annotation confidence Not enough data

Genome context

SC_0049: 1017041-1017183 [-]

Mature sma-miR-8472-5p

• Accession: MIMAT0033663
• Description: Schistosoma mansoni sma-miR-8472-5p mature miRNA
• Sequence: 47 - UUUAGAAGAUAGUAAUUAA - 65
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8472-3p

• Accession: MIMAT0033664
• Description: Schistosoma mansoni sma-miR-8472-3p mature miRNA
• Sequence: 75 - UAAUUAUCACAUUCUACUA - 93
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402