Stem-loop gra-MIR8634

Accession

MI0027576

Description

Gossypium raimondii gra-MIR8634 precursor miRNA

Sequence

aaagccuugcUUGGUAUGGAGGAUGGAAAAGagugaagauggaaaauuuauuaaucaaaaggccaagauucacaaucacuuuccuacuuuguaacuuaaccauuagauugacaaauuuucuauccuaccucuuuuccauccuucguaccaaacaaagcuua
.((((.(((.(((((((((((((((((((((((....((((((((((((.((((((.((.((..(((.((.((((.............)))))))))..)).)).)))))).))))))))))))....))))))))))))))))))))))).))).)))).

Structure

a    c   c                       ugaa            a      a  a  cc   a  c    ucacu 
 aagc uug UUGGUAUGGAGGAUGGAAAAGag    gauggaaaauuu uuaauc aa gg  aag uu acaa     u
 |||| ||| |||||||||||||||||||||||    |||||||||||| |||||| || ||  ||| || ||||     u
 uucg aac aaccaugcuuccuaccuuuucuc    cuaucuuuuaaa aguuag uu cc  uuc aa uguu     c
a    a   a                       cauc            c      a  a  aa   -  -    ucauc 

Annotation confidence Not enough data

Genome context

chr6: 37108599-37108759 [-]

Mature gra-miR8634

• Accession: MIMAT0033981
• Description: Gossypium raimondii gra-miR8634 mature miRNA
• Sequence: 11 - UUGGUAUGGAGGAUGGAAAAG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629