miRBase entry: 24044642

Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells

PubMed ID 24044642
Authors Xue W, Wang Z, Du M, Liu Y, Liu JY
Journal BMC Genomics
Volume 14
Pages 629

There are 319 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
gra-MIR7505b MI0027572 None chr10 18588372 18588480 + -
gra-MIR8632 MI0027573 None chr2 49368627 49368781 - -
gra-MIR8633 MI0027574 None chr10 6475834 6476001 - -
gra-MIR3267 MI0027575 None chr6 6562309 6562409 - -
gra-MIR8634 MI0027576 None chr6 37108599 37108759 - -
gra-MIR3476 MI0027577 None chr3 44555138 44555263 - -
gra-MIR167a MI0027578 None chr11 3832157 3832384 - -
gra-MIR167b MI0027579 None chr9 11531311 11531645 + -
gra-MIR8635 MI0027580 None chr11 1104959 1105330 + -
gra-MIR8636 MI0027581 None chr9 70463171 70463384 + -
gra-MIR8637 MI0027582 None chr1 10368597 10368963 + -
gra-MIR172a MI0027583 None chr3 38291923 38292084 - -
gra-MIR8639a MI0027584 None chr10 26764211 26764412 + -
gra-MIR8639b MI0027585 None chr11 56636473 56636674 + -
gra-MIR8639c MI0027586 None chr11 56636474 56636675 - -
gra-MIR8639f MI0027587 None chr2 31172755 31172956 + -
gra-MIR8639g MI0027588 None chr2 31172756 31172957 - -
gra-MIR8639h MI0027589 None chr7 20243037 20243238 - -
gra-MIR8639i MI0027590 None chr7 20243036 20243237 + -
gra-MIR8640 MI0027591 None chr3 9831780 9831932 + -
gra-MIR7486e MI0027592 None chr2 16902826 16902912 - -
gra-MIR8642 MI0027593 None chr5 4343457 4343639 + -
gra-MIR8643a MI0027594 None chr2 23366322 23366471 - -
gra-MIR8643b MI0027595 None chr5 63155058 63155206 + -
gra-MIR8663a MI0027596 None chr1 7969947 7970174 + -
gra-MIR8644 MI0027597 None chr13 35193216 35193363 + -
gra-MIR8645 MI0027598 None chr5 3507099 3507231 + -
gra-MIR8646 MI0027599 None chr2 7413256 7413357 - -
gra-MIR8647 MI0027600 None chr3 18899142 18899342 + -
gra-MIR8648 MI0027601 None chr10 709534 709855 + -
gra-MIR8649 MI0027602 None chr13 57495015 57495185 - -
gra-MIR8650 MI0027603 None chr10 1206814 1207083 + -
gra-MIR5741 MI0027604 None chr6 2568464 2568613 + -
gra-MIR8651 MI0027605 None chr2 36389047 36389273 - -
gra-MIR8652 MI0027606 None chr9 66471842 66472038 - -
gra-MIR8653a MI0027607 None chr11 60619123 60619451 + -
gra-MIR7502b MI0027608 None chr1 614813 614952 + -
gra-MIR7502c MI0027609 None chr5 59731063 59731230 - -
gra-MIR8709a MI0027610 None chr7 25000323 25000701 + -
gra-MIR7492d MI0027611 None chr12 13510877 13510999 - -
gra-MIR8654a MI0027612 None chr13 13905949 13906259 + -
gra-MIR8654b MI0027613 None chr13 13905950 13906260 - -
gra-MIR8654c MI0027614 None chr2 53874733 53874984 - -
gra-MIR8655 MI0027615 None chr4 4325745 4326122 + -
gra-MIR8656 MI0027616 None chr13 51813682 51813958 + -
gra-MIR8657a MI0027617 None chr10 53821358 53821568 + -
gra-MIR8657c MI0027618 None chr8 44962404 44962613 - -
gra-MIR8657d MI0027619 None chr9 6849844 6850050 - -
gra-MIR8657e MI0027620 None chr9 30750731 30750940 - -
gra-MIR8658 MI0027621 None chr10 881077 881292 + -
gra-MIR7504c MI0027622 None chr3 35987172 35987297 + -
gra-MIR8659a MI0027623 None chr2 60344590 60344746 - -
gra-MIR8659b MI0027624 None chr5 40491855 40491973 + -
gra-MIR8660 MI0027625 None chr4 34280607 34280986 - -
gra-MIR8661 MI0027626 None chr3 304604 304711 + -
gra-MIR8662 MI0027627 None chr8 50168684 50168810 - -
gra-MIR8663b MI0027628 None chr8 33878980 33879265 - -
gra-MIR8664 MI0027629 None chr6 35610906 35610986 + -
gra-MIR7486d MI0027630 None chr5 7167352 7167453 - -
gra-MIR8665 MI0027631 None chr2 22248718 22249095 - -
gra-MIR8666 MI0027632 None chr6 911375 911770 + -
gra-MIR8667 MI0027633 None chr9 16980390 16980543 + -
gra-MIR8668 MI0027634 None chr13 57945328 57945524 + -
gra-MIR8669 MI0027635 None chr12 7740459 7740719 - -
gra-MIR7503b MI0027636 None chr4 47305059 47305264 - -
gra-MIR1446 MI0027637 None chr7 3175703 3175832 + -
gra-MIR8671 MI0027638 None chr11 54253078 54253268 + -
gra-MIR8672 MI0027639 None chr11 62009473 62009687 + -
gra-MIR8673 MI0027640 None chr8 20127854 20128017 - -
gra-MIR8675a MI0027641 None chr5 144576 144668 - -
gra-MIR8676 MI0027642 None chr13 48939991 48940366 + -
gra-MIR8677 MI0027643 None KB204168.1 8447 8558 + -
gra-MIR8678 MI0027644 None chr1 52608276 52608402 - -
gra-MIR8679 MI0027645 None chr1 47791983 47792087 + -
gra-MIR8680 MI0027646 None chr4 62017078 62017285 + -
gra-MIR8681 MI0027647 None chr10 705757 706018 + -
gra-MIR8682 MI0027648 None chr10 61924019 61924168 + -
gra-MIR8683 MI0027649 None chr1 45746048 45746247 - -
gra-MIR7484c MI0027650 None chr4 60386882 60387219 - -
gra-MIR7484d MI0027651 None chr4 60907343 60907501 - -
gra-MIR8684 MI0027652 None chr1 11357060 11357238 - -
gra-MIR8685 MI0027653 None chr2 211480 211705 - -
gra-MIR8686 MI0027654 None chr8 4164151 4164348 + -
gra-MIR8687 MI0027655 None chr9 23427974 23428238 - -
gra-MIR8688 MI0027656 None chr1 11683035 11683322 + -
gra-MIR7494b MI0027657 None chr2 17985936 17986192 + -
gra-MIR8690 MI0027658 None chr5 62497766 62497908 - -
gra-MIR8691 MI0027659 None chr4 19643915 19644088 + -
gra-MIR8692 MI0027660 None chr1 35588894 35588986 - -
gra-MIR7504d MI0027661 None chr8 43497227 43497350 + -
gra-MIR7504e MI0027662 None chr2 50912389 50912508 + -
gra-MIR7504f MI0027663 None chr5 11144827 11144950 - -
gra-MIR7504g MI0027664 None chr2 42701801 42701929 + -
gra-MIR7504h MI0027665 None chr7 55185842 55185964 + -
gra-MIR7584e MI0027666 None chr9 746856 747159 - -
gra-MIR7504n MI0027667 None chr8 21259891 21260015 - -
gra-MIR8693 MI0027668 None chr9 64992845 64992949 + -
gra-MIR8694a MI0027669 None chr5 15218854 15218993 + -
gra-MIR8694b MI0027670 None chr7 44961570 44961668 + -
gra-MIR8695 MI0027671 None chr10 37612026 37612164 - -
gra-MIR8696 MI0027672 None chr7 60022594 60022744 - -
gra-MIR8697 MI0027673 None chr3 39386073 39386426 + -
gra-MIR8698 MI0027674 None chr6 32137935 32138170 + -
gra-MIR8699 MI0027675 None chr11 51833999 51834464 - -
gra-MIR8700 MI0027676 None chr6 40100451 40100531 - -
gra-MIR8701 MI0027677 None chr7 27471371 27471615 - -
gra-MIR8702 MI0027678 None chr10 58834832 58835010 + -
gra-MIR8675b MI0027679 None chr2 51421256 51421351 + -
gra-MIR8675c MI0027680 None chr7 59553415 59553496 + -
gra-MIR530a MI0027681 None chr13 58084673 58084814 + -
gra-MIR530b MI0027682 None chr9 8086491 8086636 + -
gra-MIR8703a MI0027683 None chr13 29292012 29292094 + -
gra-MIR8703b MI0027684 None chr12 1835411 1835493 + -
gra-MIR8703c MI0027685 None chr13 35810960 35811042 + -
gra-MIR8705 MI0027686 None chr5 15853753 15854164 - -
gra-MIR8706a MI0027687 None chr10 7112929 7113029 + -
gra-MIR8706b MI0027688 None chr9 24856239 24856339 + -
gra-MIR8707 MI0027689 None chr10 117161 117533 + -
gra-MIR8708 MI0027690 None chr7 51635052 51635273 - -
gra-MIR8709c MI0027691 None chr5 52808244 52808564 + -
gra-MIR8710a MI0027692 None chr11 1450830 1451035 + -
gra-MIR8710b MI0027693 None chr11 1456052 1456256 + -
gra-MIR8711 MI0027694 None chr5 19980282 19980560 - -
gra-MIR8712 MI0027695 None chr9 66376865 66377216 - -
gra-MIR7504i MI0027696 None chr10 37907762 37907962 - -
gra-MIR8713 MI0027697 None chr5 59328455 59328633 + -
gra-MIR8714 MI0027698 None chr9 66775782 66776042 - -
gra-MIR7494c MI0027699 None chr5 39574059 39574287 - -
gra-MIR8715 MI0027700 None chr12 5487096 5487178 + -
gra-MIR8716 MI0027701 None chr1 5373782 5373894 + -
gra-MIR7484e MI0027702 None chr1 5174499 5174748 - -
gra-MIR8719 MI0027703 None chr2 4465269 4465355 + -
gra-MIR8720 MI0027704 None chr12 1723978 1724102 - -
gra-MIR7486j MI0027705 None chr9 68902323 68902469 - -
gra-MIR8721a MI0027706 None chr11 57136165 57136556 + -
gra-MIR8721b MI0027707 None chr5 56870471 56870850 - -
gra-MIR164a MI0027708 None chr11 4583737 4583837 - -
gra-MIR8722 MI0027709 None chr6 6377888 6378011 + -
gra-MIR7492e MI0027710 None chr2 5712439 5712594 - -
gra-MIR8723b MI0027711 None chr5 374273 374618 - -
gra-MIR8724 MI0027712 None chr4 57593998 57594131 - -
gra-MIR8725 MI0027713 None chr3 1634804 1635105 + -
gra-MIR477 MI0027714 None chr4 43300210 43300317 - -
gra-MIR8726 MI0027715 None chr5 61906313 61906455 - -
gra-MIR7486f MI0027716 None chr13 8363683 8363769 + -
gra-MIR7486g MI0027717 None chr2 23259411 23259497 - -
gra-MIR8727 MI0027718 None chr1 675120 675394 - -
gra-MIR7492g MI0027719 None chr5 55232926 55232992 - -
gra-MIR7492h MI0027720 None chr3 19591404 19591470 + -
gra-MIR7492i MI0027721 None chr3 28533659 28533805 + -
gra-MIR7492j MI0027722 None chr6 43960593 43960703 + -
gra-MIR7492k MI0027723 None chr11 24191919 24191986 - -
gra-MIR8729 MI0027724 None chr2 534925 535123 + -
gra-MIR8730 MI0027725 None chr12 32606707 32606878 - -
gra-MIR8731 MI0027726 None chr5 64015349 64015789 - -
gra-MIR7492l MI0027727 None chr13 39672708 39672834 + -
gra-MIR7492m MI0027728 None chr5 10474072 10474246 + -
gra-MIR7506b MI0027729 None chr5 34876443 34876516 - -
gra-MIR5207 MI0027730 None chr2 55348108 55348285 + -
gra-MIR7502d MI0027731 None chr4 61154822 61154966 + -
gra-MIR8732 MI0027732 None chr5 18432907 18433256 - -
gra-MIR8733 MI0027733 None chr10 815811 815917 - -
gra-MIR8734 MI0027734 None chr11 55070142 55070317 - -
gra-MIR7484o MI0027735 None chr10 2353426 2353600 + -
gra-MIR172b MI0027736 None chr11 59826564 59826682 + -
gra-MIR7486i MI0027737 None chr11 29742716 29742791 + -
gra-MIR8771a MI0027738 None chr13 5061901 5062177 - -
gra-MIR8771b MI0027739 None chr13 2497645 2497929 + -
gra-MIR8771e MI0027740 None chr6 46011896 46012143 - -
gra-MIR399 MI0027741 None chr8 55810583 55810678 + -
gra-MIR8735 MI0027742 None chr4 49758948 49759347 - -
gra-MIR8736 MI0027743 None chr13 2656342 2656429 - -
gra-MIR8737 MI0027744 None chr8 39246641 39247007 - -
gra-MIR8738a MI0027745 None chr7 50017669 50017874 - -
gra-MIR8738b MI0027746 None chr9 21307832 21308156 - -
gra-MIR8740 MI0027747 None chr4 15549441 15549550 - -
gra-MIR8741 MI0027748 None chr7 56774055 56774254 + -
gra-MIR8771c MI0027749 None chr13 54359066 54359354 + -
gra-MIR7492n MI0027750 None chr13 12929580 12929659 + -
gra-MIR166c MI0027751 None chr5 63621122 63621276 + -
gra-MIR7484f MI0027752 None chr10 2352557 2352799 - -
gra-MIR8742a MI0027753 None chr11 53348537 53348666 + -
gra-MIR8742b MI0027754 None chr11 53348538 53348667 - -
gra-MIR8743c MI0027755 None chr10 698905 699139 + -
gra-MIR8743d MI0027756 None chr12 26054019 26054210 + -
gra-MIR8743e MI0027757 None chr1 6205271 6205483 - -
gra-MIR8743a MI0027758 None chr4 2016221 2016424 - -
gra-MIR8781a MI0027759 None chr8 409852 410304 - -
gra-MIR8744 MI0027760 None chr7 60032403 60032660 + -
gra-MIR8745 MI0027761 None chr13 57000135 57000297 + -
gra-MIR167c MI0027762 None chr6 48890368 48890469 + -
gra-MIR7494d MI0027763 None chr4 13573644 13573712 - -
gra-MIR8709b MI0027764 None chr7 23636490 23636847 - -
gra-MIR8746 MI0027765 None chr2 11723652 11723756 + -
gra-MIR8747 MI0027766 None chr11 21522773 21522893 - -
gra-MIR8748 MI0027767 None chr5 14682937 14683078 + -
gra-MIR7494e MI0027768 None chr12 14711186 14711255 - -
gra-MIR7494f MI0027769 None chr3 36657946 36658044 - -
gra-MIR8749 MI0027770 None chr11 60620749 60621059 + -
gra-MIR8750 MI0027771 None chr7 13744384 13744576 + -
gra-MIR8751a MI0027772 None chr5 49774436 49774621 - -
gra-MIR8751b MI0027773 None chr4 33504208 33504408 + -
gra-MIR8752 MI0027774 None chr7 465419 465657 - -
gra-MIR166d MI0027775 None chr2 55818490 55818615 + -
gra-MIR8753 MI0027776 None chr2 14528924 14529058 - -
gra-MIR8771d MI0027777 None chr10 33577926 33578200 - -
gra-MIR8754 MI0027778 None chr9 23129834 23130029 + -
gra-MIR8755 MI0027779 None chr10 1079518 1079686 + -
gra-MIR8756 MI0027780 None chr11 1644442 1644637 + -
gra-MIR8757a MI0027781 None chr11 61081478 61081549 - -
gra-MIR8758 MI0027782 None chr4 11590621 11590919 + -
gra-MIR8757b MI0027783 None chr12 16747581 16747656 + -
gra-MIR8759 MI0027784 None chr6 33149646 33149815 - -
gra-MIR8760 MI0027785 None chr6 7407049 7407121 - -
gra-MIR8761 MI0027786 None chr3 9712218 9712434 + -
gra-MIR8762a MI0027787 None chr6 47375019 47375276 - -
gra-MIR7502e MI0027788 None chr13 57171412 57171538 - -
gra-MIR8762b MI0027789 None chr7 26992815 26993080 + -
gra-MIR8763 MI0027790 None chr5 63182467 63182610 + -
gra-MIR8674a MI0027791 None chr10 59836292 59836652 + -
gra-MIR8674b MI0027792 None chr8 8534158 8534620 + -
gra-MIR8764 MI0027793 None chr12 33216943 33217072 - -
gra-MIR8765 MI0027794 None chr2 14450236 14450421 - -
gra-MIR8766 MI0027795 None chr10 60416606 60416696 + -
gra-MIR8653b MI0027796 None chr11 60619169 60619404 - -
gra-MIR8767a MI0027797 None chr8 50828267 50828457 - -
gra-MIR8767b MI0027798 None chr8 50828268 50828458 + -
gra-MIR8768 MI0027799 None chr7 29414742 29414861 + -
gra-MIR482c MI0027800 None chr1 8898880 8898977 + -
gra-MIR7484g MI0027801 None chr1 9134356 9134538 - -
gra-MIR8769 MI0027802 None chr6 35895579 35895675 + -
gra-MIR8770 MI0027803 None chr1 3316103 3316447 + -
gra-MIR8771f MI0027804 None chr4 7480874 7481090 - -
gra-MIR8772 MI0027805 None chr4 24684259 24684582 + -
gra-MIR8773 MI0027806 None chr12 34048888 34049027 - -
gra-MIR8774 MI0027807 None chr5 54903390 54903530 + -
gra-MIR8775 MI0027808 None chr13 51821710 51822028 - -
gra-MIR8762d MI0027809 None chr8 53253449 53253687 - -
gra-MIR7484h MI0027810 None chr2 61887427 61887570 + -
gra-MIR7484i MI0027811 None chr4 704522 704632 - -
gra-MIR7484j MI0027812 None chr1 9278760 9278990 + -
gra-MIR7484k MI0027813 None chr4 721204 721436 + -
gra-MIR8776a MI0027814 None chr13 51821770 51821970 + -
gra-MIR8776b MI0027815 None chr13 51864610 51864809 + -
gra-MIR8776c MI0027816 None chr13 51867510 51867714 + -
gra-MIR8776d MI0027817 None chr13 51870292 51870491 + -
gra-MIR8777 MI0027818 None chr4 12069781 12069920 - -
gra-MIR482d MI0027819 None chr5 56339343 56339480 + -
gra-MIR7504k MI0027820 None chr13 5200008 5200098 - -
gra-MIR7504l MI0027821 None chr1 40460049 40460122 - -
gra-MIR7504m MI0027822 None chr1 10542437 10542537 - -
gra-MIR8779 MI0027823 None chr5 22159918 22160021 + -
gra-MIR7484l MI0027824 None chr2 60358247 60358494 + -
gra-MIR8780 MI0027825 None chr10 26309228 26309601 + -
gra-MIR8743b MI0027826 None chr8 54761476 54761713 + -
gra-MIR8782 MI0027827 None chr6 32090152 32090546 - -
gra-MIR8783 MI0027828 None chr5 42120810 42121007 + -
gra-MIR7484m MI0027829 None chr13 976428 976654 - -
gra-MIR7486c MI0027830 None chr8 53809141 53809220 - -
gra-MIR8784 MI0027831 None chr8 1308896 1309019 + -
gra-MIR8785 MI0027832 None chr3 45620696 45620897 + -
gra-MIR8786a MI0027833 None chr12 13338502 13338601 - -
gra-MIR8786b MI0027834 None chr2 46579967 46580107 - -
gra-MIR8767c MI0027835 None chr1 3731724 3731985 - -
gra-MIR8787 MI0027836 None chr12 5020967 5021101 + -
gra-MIR8762e MI0027837 None chr8 43422860 43423100 - -
gra-MIR8762c MI0027838 None chr2 21452515 21452762 - -
gra-MIR8670a MI0027839 None chr10 9698287 9698428 - -
gra-MIR8670b MI0027840 None chr10 9698288 9698429 + -
gra-MIR8657b MI0027841 None chr3 5461726 5461934 - -
gra-MIR7504j MI0027842 None chr13 4360927 4361129 - -
gra-MIR8717 MI0027843 None chr11 5994050 5994365 + -
gra-MIR7492f MI0027844 None chr5 27401230 27401371 - -
gra-MIR8723a MI0027845 None chr13 4595934 4596285 - -
gra-MIR7492o MI0027846 None chr3 36809913 36810186 + -
gra-MIR8704 MI0027847 None chr11 27968361 27968712 - -
gra-MIR8674c MI0027848 None chr3 37019414 37019853 - -
gra-MIR8781b MI0027849 None chr4 33302477 33302756 - -
gra-MIR7486h MI0027850 None chr11 18117982 18118095 - -
gra-MIR7493b MI0027851 None chr4 60486648 60486916 - -
gra-MIR8739 MI0027852 None chr4 61702568 61703023 - -
gra-MIR7484n MI0027853 None chr6 49675651 49675852 + -
gra-MIR8728 MI0027854 None chr12 32870670 32870769 + -
gra-MIR8778 MI0027855 None chr1 7355145 7355459 + -
gra-MIR8718 MI0027856 None chr6 2333245 2333363 - -
gra-MIR8641 MI0027857 None chr4 755210 755406 - -
gra-MIR8639d MI0027858 None chr13 11302130 11302331 + -
gra-MIR8639e MI0027859 None chr13 11302131 11302332 - -
gra-MIR8689 MI0027860 None chr9 30068577 30069045 + -
gra-MIR8638 MI0027861 None chr13 56581801 56582022 - -
gra-MIR7502f MI0027862 None chr7 57294600 57294742 - -
gra-MIR827b MI0031497 None chr11 55877977 55878115 + -
ghr-MIR156a MI0005638 None None None -
ghr-MIR156b MI0005639 None None None -
ghr-MIR156c MI0005640 None None None -
ghr-MIR156d MI0005641 None None None -
ghr-MIR162a MI0005644 None None None -
ghr-MIR166b MI0005645 None None None -
ghr-MIR390a MI0005647 0 None None -
ghr-MIR390b MI0005648 0 None None -
ghr-MIR390c MI0005649 0 None None -
ghr-MIR396a MI0005650 0 None None -
ghr-MIR396b MI0005651 0 None None -
ghr-MIR399a MI0005652 None None None -
ghr-MIR399b MI0005653 None None None -
gra-MIR482 MI0013536 None chr9 37350782 37350933 + -
ghr-MIR167a MI0013539 None None None -
ghr-MIR172 MI0013540 None None None -
ghr-MIR393 MI0013541 None None None -
ghr-MIR482a MI0013546 0 None None -
ghr-MIR482b MI0013547 0 None None -
ghr-MIR399c MI0013556 None None None -
ghr-MIR399d MI0013557 None None None -
ghr-MIR167b MI0022545 None None None -
ghr-MIR169a MI0022546 None None None -
ghr-MIR399e MI0022547 None None None -
ghr-MIR160 MI0024179 0 None None -
ghr-MIR169b MI0024199 None None None -
ghr-MIR7504b MI0024201 None None None -



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