Stem-loop gra-MIR7484m

Accession

MI0027829

Description

Gossypium raimondii gra-MIR7484m precursor miRNA

Sequence

uaaauuagccUUUGUAUGUUAGAUCGAAGAGcaaauuggcccuuuuauuguaaauuucauccauuucuacuguuaaaaacuaaucccuguaugucgacaugaggaauauguggcacgccaugucugguuauuccaucagcaucgcuaguuuaauaauuagaauagaugaaaauuuuaacuaaaaggacuacuuugcucuuugauuuaacuuauaaggacuaauuugc
((((((((.(((((((.((((((((((((((((((.(((.((((((((((.((.(((((((...(((((.((((((..((((.........((((.(((((.....))))))))).((.(((.(((((......)))))))).))))))))))))..)))))..))))))).)).))).))))))).))).)))))))))))))))))).))))))).)))))))).

Structure

-        c       U                  u   c       -   u  a       cau     -c      aa    aucccuguaugucgacaugaggaauauguggcac  c   u     ua 
 uaaauuag cUUUGUA GUUAGAUCGAAGAGcaaa ugg ccuuuua uug aa uuucauc   uucua  uguuaa  acua                                  gc aug cuggu  u
 |||||||| ||||||| |||||||||||||||||| ||| ||||||| ||| || |||||||   |||||  ||||||  ||||                                  || ||| |||||   
 guuuaauc ggaauau caauuuaguuucucguuu auc ggaaaau aau uu aaaguag   aagau  auaauu  ugau                                  cg uac gacua  u
c        a       u                  c   a       c   u  a       -au     ua      --    ----------------------------------  c   -     cc 

Annotation confidence Not enough data

Genome context

chr13: 976428-976654 [-]

Mature gra-miR7484m

• Accession: MIMAT0034234
• Description: Gossypium raimondii gra-miR7484m mature miRNA
• Sequence: 11 - UUUGUAUGUUAGAUCGAAGAG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629