Stem-loop gra-MIR8632

Accession

MI0027573

Description

Gossypium raimondii gra-MIR8632 precursor miRNA

Sequence

gagguuguuuauaaaccuaauuuguuuggaguuccaacuucuaacucauuuucagccuuguuucuuucgaauauaguuguuuucuaccuaaaccacgcaagcaauugaaagaauuagguugaaaAUGAGCUAGAAGUUGGAACUCuaaaaaccaa
.(((((.......)))))......(((((((((((((((((((.((((((((((((((...(((((((((.....((.((((.......)))).))........)))))))))..)))))))))))))).)))))))))))))))))))......

Structure

gagguuguuuauaaaccuaauuug                   a              ugu         ---auaua  u    uc 
                        uuuggaguuccaacuucua cucauuuucagccu   uucuuucga        gu guuu  u
                        ||||||||||||||||||| ||||||||||||||   |||||||||        || ||||  a
                        aaauCUCAAGGUUGAAGAU GAGUAaaaguugga   aagaaaguu        ca caaa  c
------------------aaccaa                   C              -uu         aacgaacg  c    uc 

Annotation confidence Not enough data

Genome context

chr2: 49368627-49368781 [-]

Mature gra-miR8632

• Accession: MIMAT0033978
• Description: Gossypium raimondii gra-miR8632 mature miRNA
• Sequence: 125 - AUGAGCUAGAAGUUGGAACUC - 145
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629