Stem-loop gra-MIR8767b

Accession

MI0027798

Description

Gossypium raimondii gra-MIR8767b precursor miRNA

Sequence

ccucucauuuUUCAACUCUGCCAAGCAAUUGgugaaaagaaaauuuagaaauauggaacauugaagaagcagaaaaauagaaagaaaaaaauacauuuuccauuaaugugcuugauaagaaagaugggaaaauugaaaaagaaguaauuuucuuuucaucaauugcuuggcagaguugaaaaaugagagga
(((((((((((((((((((((((((((((((((((((((((((((................((......))........................(((((((((..(.(........).)..)))))))))..............))))))))))))))))))))))))))))))))))))))))))))).

Structure

-                                             uagaaauauggaacauugaagaagcagaaaaauagaaagaaaaaaauaca         aa g gcu 
 ccucucauuuUUCAACUCUGCCAAGCAAUUGgugaaaagaaaauu                                                  uuuuccauu  u u   u
 |||||||||||||||||||||||||||||||||||||||||||||                                                  |||||||||  | |    
 ggagaguaaaaaguugagacgguucguuaacuacuuuucuuuuaa                                                  aaaggguag  a a   g
a                                             ------------------------------------ugaagaaaaaguua         aa g aua 

Annotation confidence Not enough data

Genome context

chr8: 50828268-50828458 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gra-MIR8767b

Mature gra-miR8767b

• Accession: MIMAT0034203
• Description: Gossypium raimondii gra-miR8767b mature miRNA
• Sequence: 11 - UUCAACUCUGCCAAGCAAUUG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629