Stem-loop gra-MIR167c

Accession

MI0027762

Description

Gossypium raimondii gra-MIR167c precursor miRNA

Literature search

2 open access papers mention gra-MIR167c
(11 sentences)

Sequence

ugcuccaucaUCAGAUGAAGCUGCCAGCAUGAucuuaauuucccucuguuuuaucgaggaaaaaucagaucauguggcaguuucaccuguugcugcuugcac
(((..((.((.(((.(((((((((((.((((((((...(((.((((.........)))).)))...))))))))))))))))))).))).)).))...))).

Structure

-   -uc  u  U   A           G        uaa   c    ugu 
 ugc   ca ca CAG UGAAGCUGCCA CAUGAucu   uuu ccuc   u
 |||   || || ||| ||||||||||| ||||||||   ||| ||||   u
 acg   gu gu guc acuuugacggu guacuaga   aaa ggag   u
c   uuc  c  u   c           -        cua   a    cua 

Annotation confidence Not enough data

Genome context

chr6: 48890368-48890469 [+]

Mature gra-miR167c

• Accession: MIMAT0034167
• Description: Gossypium raimondii gra-miR167c mature miRNA
• Sequence: 11 - UCAGAUGAAGCUGCCAGCAUGA - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629