Stem-loop gra-MIR8726

Accession

MI0027715

Description

Gossypium raimondii gra-MIR8726 precursor miRNA

Sequence

cagcucgagguuuugucuccugauuccaucgagagcagcacgggauucacuugaucagguuaucagcacaaucagacaaggcacccccacuccgcaaaucccgcacgguucuCGAUGGAGUCUGGAGACAAAAcccagaccaa
..(.((..((((((((((((.(((((((((((((((.(..(((((((..((((.((.((((........)))).))))))((...........)).)))))))..).))))))))))))))).))))))))))))..)).)..

Structure

ca c  ga            u               a ca       --------------ca    a  a    auc 
  g uc  gguuuugucucc gauuccaucgagagc g  cgggauu                cuug uc gguu   a
  | ||  |||||||||||| ||||||||||||||| |  |||||||                |||| || ||||    
  c ag  ccAAAACAGAGG CUGAGGUAGCucuug c  gcccuaa                gaac ag cuaa   g
aa c  ac            U               g ac       acgccucacccccacg    -  a    cac 

Annotation confidence Not enough data

Genome context

chr5: 61906313-61906455 [-]

Mature gra-miR8726

• Accession: MIMAT0034120
• Description: Gossypium raimondii gra-miR8726 mature miRNA
• Sequence: 113 - CGAUGGAGUCUGGAGACAAAA - 133
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629