Stem-loop gra-MIR8768

Accession

MI0027799

Description

Gossypium raimondii gra-MIR8768 precursor miRNA

Sequence

uccuuuucuuUUCCAUGUCACAGAGAUGUUGuguaggucauuucaaaucguuucucugcucagaaauuaauagucaggaagcaucaacaucuuugugauauggaaaagaaggugaaggag
((((((((((((((((((((((((((((((((((...((..........((((((......))))))..........)).))).)))))))))))))))))))))))))....)))))).

Structure

-      ----                         -   agg  auuucaaauc      cu 
 uccuuu    ucuuUUCCAUGUCACAGAGAUGUUG ugu   uc          guuucu  g
 ||||||    ||||||||||||||||||||||||| |||   ||          ||||||   
 aggaag    agaaaagguauaguguuucuacaac acg   ag          uaaaga  c
g      ugga                         u   --a  gacugauaau      cu 

Annotation confidence Not enough data

Genome context

chr7: 29414742-29414861 [+]

Mature gra-miR8768

• Accession: MIMAT0034204
• Description: Gossypium raimondii gra-miR8768 mature miRNA
• Sequence: 11 - UUCCAUGUCACAGAGAUGUUG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629