Stem-loop gra-MIR7504i

Accession

MI0027696

Description

Gossypium raimondii gra-MIR7504i precursor miRNA

Sequence

agaaaggauuAUAUGAAACUGAGAUACCAUGucauuuguauccauuuucaauaauuuaaugucauuuuagcauuuucaucuuaaauuucagcacauuauguuggauuugguuauuuuuaagaugaaaaaugcuaaaaugauuuuaaauuauugaaaagagauacaaugacaugguaucccaguuucuuacaaucuuuucuc
((((((((((.((.(((((((.((((((((((((((.(((((..(((((((((((((((.(((((((((((((((((((((((((.(((((((.....)))))))..........))))))))).)))))))))))))))).)))))))))))))))..))))))))))))))))))).))))))).)).)))))))))).

Structure

-          A  U       A              u     ca               u                -         ---------u       c 
 agaaaggauu UA GAAACUG GAUACCAUGucauu guauc  uuuucaauaauuuaa gucauuuuagcauuuu caucuuaaa          uucagca a
 |||||||||| || ||||||| |||||||||||||| |||||  ||||||||||||||| |||||||||||||||| |||||||||          ||||||| u
 ucuuuucuaa au cuuugac cuaugguacaguaa cauag  aaaaguuauuaaauu uaguaaaaucguaaaa guagaauuu          agguugu u
c          c  u       c              -     ag               u                a         uuauugguuu       a 

Annotation confidence Not enough data

Genome context

chr10: 37907762-37907962 [-]

Mature gra-miR7504i

• Accession: MIMAT0034101
• Description: Gossypium raimondii gra-miR7504i mature miRNA
• Sequence: 11 - AUAUGAAACUGAGAUACCAUG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629