Accession
MI0027825
Description
Gossypium raimondii
gra-MIR8780 precursor miRNA
Sequence
1048
reads,
180.0
reads per million, 13 experiments
ccuugagagugcgauuuguugccacgucagCAAAGCACUCUGACGUGGCcgugauuugaugacgcggcgcgucccuggggacacgauuuagaccacacgugaauaguacaacggucaaaaauuugaccguugcccccccaacgguaaaaaaaaaaauccuauaaauacccccaccccuuuuuuuuucacaaacaaauccugucucaaauuuccuuucaauuuccucucaauuuccuuucaaauuucucucaaauucauauuuaaucucaauuagcucucaauauccuuuuaaauuucucuuaaaucccuauuuucaaauaauuuuaaaaaauuuugauuuUUUGAUGAUGUGGCAACAAAGCGCugccuugaga
.((((((.(((((.(((((((((((((((.(((((......((((((.(((((.((....)))))))))))))....((((((.(((((........(((........((((((((((....))))))))))........)))((.(((((((((......................))))))))).))....))))).))))))........................................................................((((.((..(((.(((((......((((....))))......))))).)))..)).))))..))))).))))))))))))))).))).)))))))).
.((((((.(((((.(((((((((((((((.(((((......((((((.(((((.((....)))))))))))))....((((((.(((((........(((........((((((((((....))))))))))........)))((.(((((((((......................))))))))).))....))))).))))))........................................................................((((.((..(((.(((((......((((....))))......))))).)))..)).))))..))))).))))))))))))))).))).)))))))).
Structure
c a - a g --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACUCU G a u cuugag gu gcg uuuguugccacguca CAAAG GACGUG Ccgug uu g |||||| || ||| ||||||||||||||| ||||| |||||| ||||| || gaguuc cg CGC AAACAACGGUGUAGU GUUUu cugcgc ggcgc ag a a - u G A uuaguuuuaaaaaauuuuaauaaacuuuuaucccuaaauucucuuuaaauuuuccuauaacucucgauuaacucuaauuuauacuuaaacucucuuuaaacuuuccuuuaacucuccuuuaacuuuccuuuaaacucuguccuaaacaaacacuuuuuuuuuccccacccccauaaauauccuaaaaaaaaaaauggcaacccccccguugccaguuuaaaaacuggcaacaugauaagugcacaccagauuuagcacaggggucc - - u
Annotation confidence
Low
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Genome context
chr10: 26309228-26309601 [+]
Database links
Mature gra-miR8780-5p
| Accession | MIMAT0055532 |
| Description | Gossypium raimondii gra-miR8780-5p mature miRNA |
| Sequence | 31 - CAAAGCACUCUGACGUGGC - 49 |
| Evidence |
experimental
unknown |
Mature gra-miR8780-3p
| Accession | MIMAT0034230 |
| Description | Gossypium raimondii gra-miR8780-3p mature miRNA |
| Sequence | 341 - UUUGAUGAUGUGGCAACAAAGCGC - 364 |
| Evidence |
experimental
Illumina [1] |
References
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