Stem-loop gra-MIR8695

Accession

MI0027671

Description

Gossypium raimondii gra-MIR8695 precursor miRNA

Sequence

ugacaugaucAGGAUGUAAAAGAAUAGGUGAaaggauuaaguauaucagauaaaauacaucuauuacaaggaacaaaauuaaucuauaucugauaaucuuuaauucuuuaaccuauccuucuacauccucauaauguau
..((((.((.((((((((.(((.((((((.(((((((((((..(((((((((..................................)))))))))...))))))))))).)))))).))).)))))))).)).))))..

Structure

ug    g  c        A   A      G           -ua         aaauacaucuauuaca 
  acau au AGGAUGUA AAG AUAGGU Aaaggauuaag   uaucagaua                a
  |||| || |||||||| ||| |||||| |||||||||||   |||||||||                 
  ugua ua uccuacau uuc uaucca uuucuuaauuu   auagucuau                g
ua    a  c        c   c      a           cua         aucuaauuaaaacaag 

Annotation confidence Not enough data

Genome context

chr10: 37612026-37612164 [-]

Mature gra-miR8695

• Accession: MIMAT0034076
• Description: Gossypium raimondii gra-miR8695 mature miRNA
• Sequence: 11 - AGGAUGUAAAAGAAUAGGUGA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629