Stem-loop gra-MIR8748

Accession

MI0027767

Description

Gossypium raimondii gra-MIR8748 precursor miRNA

Sequence

auaaucaaguaauucguuuuguccauuucaaucgaaggcagugacccuauuacuaaaacauguuauacuccaauucugucacagguuauaguaaugggcucaucguuuUCGGUGGAGAUGGAUAAAAUGAAUgacuugauua
.(((((((((.((((((((((((((((((.(((((((((.((((.((((((((((.(((.(((.(((.........))).))).))).)))))))))).)))).))))))))).)))))))))))))))))).)))))))))

Structure

a         a                  a         a    c          a   a   u   cuc 
 uaaucaagu auucguuuuguccauuuc aucgaaggc guga ccuauuacua aac ugu aua   c
 ||||||||| |||||||||||||||||| ||||||||| |||| |||||||||| ||| ||| |||   a
 auuaguuca UAAGUAAAAUAGGUAGAG UGGCUuuug uacu ggguaaugau uug aca ugu   a
-         g                  G         c    c          a   g   c   cuu 

Annotation confidence Not enough data

Genome context

chr5: 14682937-14683078 [+]

Mature gra-miR8748

• Accession: MIMAT0034172
• Description: Gossypium raimondii gra-miR8748 mature miRNA
• Sequence: 109 - UCGGUGGAGAUGGAUAAAAUGAAU - 132
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629