Stem-loop gra-MIR8741

Accession

MI0027748

Description

Gossypium raimondii gra-MIR8741 precursor miRNA

Sequence

auccccauacUAGCACUGAAGAUGAUGAUGGugacgggcaugaucuaacuuggaaccaguucucauuuucuugagggaguggacauagcaaaucugauuucucuuuguuuuuucuacuggcugagcuugacacuucaucacaaaccucgaccgauacaugaucaagcccaucaccaucaucaucuucagugcuagggaua
(((((.....((((((((((((((((((((((((.((((.(((((..............((((((......))))))((((((...((((((...........))))))...))))))((.((((.(((...........)))..)))).)).......))))).)))).))))))))))))))))))))))))))))).

Structure

-     cauac                        c    a     ---------uaacuuggaaccaguucucauuuucuugaggg      cau      ucug 
 auccc     UAGCACUGAAGAUGAUGAUGGuga gggc ugauc                                         agugga   agcaaa    a
 |||||     |||||||||||||||||||||||| |||| |||||                                         ||||||   ||||||    u
 uaggg     aucgugacuucuacuacuaccacu cccg acuag                                         ucaucu   uuguuu    u
a     -----                        a    a     uacauagccagcuccaaacacuacuucacaguucgagucgg      uuu      cucu 

Annotation confidence Not enough data

Genome context

chr7: 56774055-56774254 [+]

Mature gra-miR8741

• Accession: MIMAT0034153
• Description: Gossypium raimondii gra-miR8741 mature miRNA
• Sequence: 11 - UAGCACUGAAGAUGAUGAUGG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629