miRBase entry: gra-MIR8703c

Stem-loop gra-MIR8703c


Accession
MI0027685
Description
Gossypium raimondii gra-MIR8703c precursor miRNA


Sequence

477 reads, 103.0 reads per million, 12 experiments
uauugaaauuAGUAGUCUAAUUGGUAUAGCUGAAcaagaaaaaauuuaccagucguaucaaAUUUGGAUUAUUAAAAAGAUaa
((((....(((((((((((((((((((.((((.................)))).)))))))..))))))))))))...)))).

Structure
-    gaaa            --       A    AAcaaga 
 uauu    uuAGUAGUCUAA  UUGGUAU GCUG       a
 ||||    ||||||||||||  ||||||| ||||       a
 aUAG    AAUUAUUAGGUU  aacuaug ugac       a
a    -AAA            UA       c    cauuuaa 


Annotation confidence Low
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Genome context
chr13: 35810960-35811042 [+]

Database links

Mature gra-miR8703c-5p

Accession MIMAT0034090
Description Gossypium raimondii gra-miR8703c-5p mature miRNA
Sequence 11 - AGUAGUCUAAUUGGUAUAGCUGAA - 34
Evidence experimental
Illumina [1]

Mature gra-miR8703c-3p

Accession MIMAT0055426
Description Gossypium raimondii gra-miR8703c-3p mature miRNA
Sequence 62 - AUUUGGAUUAUUAAAAAGAU - 81
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629