Stem-loop gra-MIR7503b

Accession

MI0027636

Description

Gossypium raimondii gra-MIR7503b precursor miRNA

Sequence

uuaauaaccgAACCGAUGGUUGAACAUGUUAGACcacuaguucucgauucaaccaguucgaucgauucgacugugggaccaaguaaaauugguuuuuuauuuuuuauuuuuuuagauuuuugugaacuuuuaauuauuguugguuugacaaucgaaucgaccgaacugguggucuaaccuguuuaaccauagguucgauuauuaaa
(((((((.((((((.(((((((((((.((((((((((((((((((((..........))))(((((((((.(((.(((((((....((((((...(((((.....((((....))))....)))))...))))))....))))))).))).)))))))))..)))))))))))))))).))))))))))).)))))).))))))).

Structure

-       c      G           U                ucgauucaaccaguucga         c   g       guaa      uuu     uuuuu    u 
 uuaauaa cgAACC AUGGUUGAACA GUUAGACcacuaguuc                  ucgauucga ugu ggaccaa    aauugg   uuuau     auuu u
 ||||||| |||||| ||||||||||| ||||||||||||||||                  ||||||||| ||| |||||||    ||||||   |||||     ||||  
 aauuauu gcuugg uaccaauuugu caaucugguggucaag                  agcuaagcu aca uuugguu    uuaauu   aagug     uaga u
a       a      a           c                ----------------cc         a   g       guua      uuc     -uuuu    u 

Annotation confidence Not enough data

Genome context

chr4: 47305059-47305264 [-]

Mature gra-miR7503b

• Accession: MIMAT0034041
• Description: Gossypium raimondii gra-miR7503b mature miRNA
• Sequence: 11 - AACCGAUGGUUGAACAUGUUAGAC - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629