Accession
MI0027718
Description
Gossypium raimondii
gra-MIR8727 precursor miRNA
Sequence
371
reads,
57.0
reads per million, 13 experiments
ucauccaccgagcagucaaucggacucucaAACAGUGGAGGUAUUGUGCCuaaggugucuaugcucaguuuagccgaagguuuuugucuuucaacuccgaggagauuccaacggguucacggaguuuagggacugucuaaucaccgaggaaauguuuagcaauuggccuuaguggguuuugaacccaugcccuuaaaugacauuaguggguaagaacaucccaggcauaauACCUCCAUUGUUUGAGGGUCugaucguagacacuucaaagacuu
.........(((..(((.(((((((((((((((((((((((((((((((((..(((((((.((((((.(....((...(((..((((((((.(((((((..((.((((....)))))).))))))).)))))).....))..)))..)).((((((........(((....(((((((...)))))))))).......))))))).)))))))).)))))..)))))))))))))))))))))))))))))))))....)))..)))........
.........(((..(((.(((((((((((((((((((((((((((((((((..(((((((.((((((.(....((...(((..((((((((.(((((((..((.((((....)))))).))))))).)))))).....))..)))..)).((((((........(((....(((((((...)))))))))).......))))))).)))))))).)))))..)))))))))))))))))))))))))))))))))....)))..)))........
Structure
ucauccacc ca ---a aa - a g ---------------------------------------------------uuag gaa uu ----- c ag g c
gag guc aucggacucucaAACAGUGGAGGUAUUGUGCCu ggugu cu ugcuca u cc ggu uu gucuuu aacuccg ga auuc a
||| ||| ||||||||||||||||||||||||||||||||| ||||| || |||||| | || ||| || |||||| ||||||| || ||||
cuu cag uaguCUGGGAGUUUGUUACCUCCAuaauacgga cuaca ga augggu a gg cca aa caggga uugaggc cu uggg a
-uucagaaa ca augc cc a - g uuacaguaaauucccguacccaaguuuugggugauuccgguuaacgauuuguaaa -ag cu ucugu u -a - c
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr1: 675120-675394 [-]
Database links
Mature gra-miR8727-5p
| Accession | MIMAT0034123 |
| Description | Gossypium raimondii gra-miR8727-5p mature miRNA |
| Sequence | 31 - AACAGUGGAGGUAUUGUGCC - 50 |
| Evidence |
experimental
Illumina [1] |
Mature gra-miR8727-3p
| Accession | MIMAT0055451 |
| Description | Gossypium raimondii gra-miR8727-3p mature miRNA |
| Sequence | 232 - ACCUCCAUUGUUUGAGGGUC - 251 |
| Evidence |
experimental
unknown |
References
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