Stem-loop gra-MIR8641

Accession

MI0027857

Description

Gossypium raimondii gra-MIR8641 precursor miRNA

Sequence

uuuuuuuuUUUUUACUUUGGGACACUGAUGGCuaggaccuuaaaaaaauuaaauacacuggugccaaccaacaauguuccaaaauuaaaaaaaaaauacauugggagccgaaaauuauacuuggugcuggccauguaaaaaaauuuuaaauacacuaauaccggccauuagugucccaaaguaaaaaaaaaugucuu
....(((((((((((((((((((((((((((((.((......................((((....)))).((((((....................))))))..............(((.((((....)))).))).......................)))))))))))))))))))))))))))))))......

Structure

--uuuu                             a  accuuaaaaaaauuaaauacacuggugccaaccaacaauguuccaaaauuaaaaaaaaaauacauugggagccgaaaauua   u    g 
      uuuuUUUUUACUUUGGGACACUGAUGGCu gg                                                                                 uac uggu c
      ||||||||||||||||||||||||||||| ||                                                                                 ||| ||||  
      aaaaaaaaaugaaacccugugauuaccgg cc                                                                                 aug accg u
uucugu                             -  ----------------------------------------------------------auaaucacauaaauuuuaaaaaa   u    g 

Annotation confidence Not enough data

Genome context

chr4: 755210-755406 [-]

Mature gra-miR8641

• Accession: MIMAT0034262
• Description: Gossypium raimondii gra-miR8641 mature miRNA
• Sequence: 9 - UUUUUACUUUGGGACACUGAUGGC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629