Stem-loop gra-MIR8640

Accession

MI0027591

Description

Gossypium raimondii gra-MIR8640 precursor miRNA

Sequence

cacguaggacguguuuucagugcauuaucagaaaaaagcacugaaaguaccucuaguuggacacauuuucaacuaacauggcacgaaaacacguucaacuggauucgcuuucagugcuuuuuUCUGACAGUGCACUGAAAACGcguccuacgu
.(((((((((((((((((((((((((.(((((((((((((((((((((...(((((((((((...(((((..............)))))...)))))))))))...))))))))))))))))))))).)))))))))))))))))))))))))

Structure

c                         a                     acc           aca     aacuaa 
 acguaggacguguuuucagugcauu ucagaaaaaagcacugaaagu   ucuaguuggac   uuuuc      c
 ||||||||||||||||||||||||| |||||||||||||||||||||   |||||||||||   |||||       
 ugcauccugcGCAAAAGUCACGUGA AGUCUuuuuucgugacuuucg   aggucaacuug   aaaag      a
-                         C                     cuu           cac     cacggu 

Annotation confidence Not enough data

Genome context

chr3: 9831780-9831932 [+]

Mature gra-miR8640

• Accession: MIMAT0033996
• Description: Gossypium raimondii gra-miR8640 mature miRNA
• Sequence: 123 - UCUGACAGUGCACUGAAAACG - 143
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629