Stem-loop gra-MIR8728

Accession

MI0027854

Description

Gossypium raimondii gra-MIR8728 precursor miRNA

Sequence

cgggucggguCGGGCUUGGGCAAAAUUUUAGGCUcauuuuuuaggccagacccggccuaguaaaugggccugaauuuuuaguuaagccuggccugaaccu
.((((((((((((((((((..((((.(((((((((((((.(((((((......))))))).))))))))))))).))))..)))))))))))))).))))

Structure

c    -              GC    U             u       ag 
 gggu cggguCGGGCUUGG  AAAA UUUAGGCUcauuu uuaggcc  a
 |||| ||||||||||||||  |||| ||||||||||||| |||||||   
 ucca guccgguccgaauu  uuuu aaguccggguaaa gauccgg  c
-    a              ga    u             u       cc 

Annotation confidence Not enough data

Genome context

chr12: 32870670-32870769 [+]

Mature gra-miR8728

• Accession: MIMAT0034259
• Description: Gossypium raimondii gra-miR8728 mature miRNA
• Sequence: 11 - CGGGCUUGGGCAAAAUUUUAGGCU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629