Stem-loop ghr-MIR7504b

Accession

MI0024201

Description

Gossypium hirsutum ghr-MIR7504b precursor miRNA

Literature search

3 open access papers mention ghr-MIR7504b
(6 sentences)

Sequence

11559 reads, 536.0 reads per million, 50 experiments

ccAAUAAGAGAAUGACAAAUCAGAUUUuuccuucugauuuuuaauauuuuuaguugaacuugaauauuuucAGGAGGAAAAAUCUGAUUUGUCAUucucuuauug
.((((((((((((((((((((((((((((((((((((.....(((((((..(((...))).))))))).))))))))))))))))))))))))))))))))))))

Structure

c                                    uuuuu       uu   u 
 cAAUAAGAGAAUGACAAAUCAGAUUUuuccuucuga     aauauuu  agu  
 ||||||||||||||||||||||||||||||||||||     |||||||  ||| g
 guuauucucuUACUGUUUAGUCUAAAAAGGAGGAcu     uuauaag  uca  
-                                    ----u       -u   a 

Annotation confidence Low

Genome context

Unknown

Mature ghr-miR7504b-5p

• Accession: MIMAT0055341
• Description: Gossypium hirsutum ghr-miR7504b-5p mature miRNA
• Sequence: 3 - AAUAAGAGAAUGACAAAUCAGAUUU - 27
• Evidence: experimental ; unknown

Mature ghr-miR7504b-3p

• Accession: MIMAT0029159
• Description: Gossypium hirsutum ghr-miR7504b-3p mature miRNA
• Sequence: 72 - AGGAGGAAAAAUCUGAUUUGUCAU - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900