Accession
MI0027613
Description
Gossypium raimondii
gra-MIR8654b precursor miRNA
Sequence
203
reads,
43.0
reads per million, 12 experiments
aacuuauucuuuuucuccaucaaaguaguauccuuaaccucauuguccaauacuuguggcagaguugggggcaauaagacuuuucgggggaagagugauugugacuauggagaaaagcugaaaugcgacucaagucgguAACGGUUGCUGUGAUUAAAuaauaacuacacccauugucaccuugacucaaauuucaacuuuuucuccaccgucacaguuacucccccugaaaguuuucuuaccccuaccacuaacauaaguuucaaacaacgagguuaaggauacuacuuuGAUGGAGAAAAAGAAUAAgu
.((((((((((((((((((((((((((((((((((((((((.((((.....(((((((..((.(.((((((.((.((((((((.((((((..(((((((((((((..((((((((((.((((((..((.((((...(((.(((((.(.((((.(((.....))).)))).).))))).))))))).))..)))))).).)))))))))..))))))))))))))))))))))))))).)).)))))).).))..))))))).....)))).))))))))))))))))))))))))))))))))))))))))
.((((((((((((((((((((((((((((((((((((((((.((((.....(((((((..((.(.((((((.((.((((((((.((((((..(((((((((((((..((((((((((.((((((..((.((((...(((.(((((.(.((((.(((.....))).)))).).))))).))))))).))..)))))).).)))))))))..))))))))))))))))))))))))))).)).)))))).).))..))))))).....)))).))))))))))))))))))))))))))))))))))))))))
Structure
a a ccaau gc a u c u u aa ua - c gc c guc A U C A A acuuauucuuuuucuccaucaaaguaguauccuuaaccuc uugu acuugug ag g uggggg aa aagacuuu cggggg gagugauugugac uggagaaaa g ugaaau ga ucaa ggu ACGGU G UGUG UUA A |||||||||||||||||||||||||||||||||||||||| |||| ||||||| || | |||||| || |||||||| |||||| ||||||||||||| ||||||||| | |||||| || |||| ||| ||||| | |||| ||| u ugAAUAAGAAAAAGAGGUAGuuucaucauaggaauuggag aaca ugaauac uc c aucccc uu uuuugaaa gucccc cucauugacacug accucuuuu c acuuua cu aguu cca uguua c acau aau a - c aacuu aa a c a c - -- cc u a aa c --- c c c c a
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr13: 13905950-13906260 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gra-MIR8654b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gra-miR8654b-5p
| Accession | MIMAT0055373 |
| Description | Gossypium raimondii gra-miR8654b-5p mature miRNA |
| Sequence | 140 - AACGGUUGCUGUGAUUAAA - 158 |
| Evidence |
experimental
unknown |
Mature gra-miR8654b-3p
| Accession | MIMAT0034018 |
| Description | Gossypium raimondii gra-miR8654b-3p mature miRNA |
| Sequence | 292 - GAUGGAGAAAAAGAAUAA - 309 |
| Evidence |
experimental
Illumina [1] |
References
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