Stem-loop gra-MIR8764

Accession

MI0027793

Description

Gossypium raimondii gra-MIR8764 precursor miRNA

Sequence

guacuaagggUUAGAUUGCAUUUUACCCCUUuuacugaaaaacaugggccgguuugcucuuugauuuuguauagggacuaauuugcucuuuuuuuaaguaaaggggcaaaaugcaaucaaacuuaguaca
((((((((.....(((((((((((.(((((((.(((((((((...((((.((((.(((((.((......)).)))).).)))).)))).)))))).)))))))))).)))))))))))...)))))))).

Structure

-        ggUUA           A       u   -      cau    c    u -    u  au 
 guacuaag     GAUUGCAUUUU CCCCUUu acu gaaaaa   gggc gguu g cucu ug  u
 ||||||||     ||||||||||| ||||||| ||| ||||||   |||| |||| | |||| ||   
 caugauuc     cuaacguaaaa ggggaaa uga uuuuuu   cucg uuaa c ggga au  u
a        --aaa           c       -   a      --u    u    u a    u  gu 

Annotation confidence Not enough data

Genome context

chr12: 33216943-33217072 [-]

Mature gra-miR8764

• Accession: MIMAT0034198
• Description: Gossypium raimondii gra-miR8764 mature miRNA
• Sequence: 11 - UUAGAUUGCAUUUUACCCCUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629