miRBase entry: gra-MIR7486h

Stem-loop gra-MIR7486h


Accession
MI0027850
Description
Gossypium raimondii gra-MIR7486h precursor miRNA


Sequence

4043 reads, 747.0 reads per million, 13 experiments
caggaaaucgcggccaugucagcgcgcuuugcugacguggcAGCAAAUCGCGUCCUAGAGGGcgcgauuuguugcuauauCAGCAACUCGCGCUGACGUGGACAcgauuuccuu
.(((((((((.(.(((((((((((((..(((((((.(((((((((((((((((((....))))))))))))))))))).)))))))..))))))))))))).).))))))))).

Structure
c         c g             cu       c                   U 
 aggaaaucg g ccaugucagcgcg  uugcuga guggcAGCAAAUCGCGUCC A
 ||||||||| | |||||||||||||  ||||||| |||||||||||||||||||  
 uccuuuagc C GGUGCAGUCGCGC  AACGACu uaucguuguuuagcgcGGG G
u         A A             UC       a                   A 


Annotation confidence Low
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Genome context
chr11: 18117982-18118095 [-]

Database links

Mature gra-miR7486h-5p

Accession MIMAT0055549
Description Gossypium raimondii gra-miR7486h-5p mature miRNA
Sequence 42 - AGCAAAUCGCGUCCUAGAGGG - 62
Evidence experimental
unknown

Mature gra-miR7486h-3p

Accession MIMAT0034255
Description Gossypium raimondii gra-miR7486h-3p mature miRNA
Sequence 81 - CAGCAACUCGCGCUGACGUGGACA - 104
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629