Stem-loop gra-MIR7492e

Accession

MI0027710

Description

Gossypium raimondii gra-MIR7492e precursor miRNA

Sequence

ccgcuaaaggCCAUGAUCUUUAGCGGCGUUUgcguuaaaagcgucacuaaagaccaucaucuuuagcggcguuuguaguagaagcgcugcuaaaggucaugauaucuagcgacguuuguggcaaaagugccgcuaaagaccaugaucuuuagcggc
((((((((((.((((.(((((((((((((((((.....(((((((.(((.....(((.((((((((((((((((.......)))))))))))))))).))).....))).)))))))...)))))..)))))))))))).)))).)))))))))).

Structure

-          C    A            --     guuaa       a   aagac   c                gu 
 ccgcuaaagg CAUG UCUUUAGCGGCG  UUUgc     aagcguc cua     cau aucuuuagcggcguuu  a
 |||||||||| |||| ||||||||||||  |||||     ||||||| |||     ||| ||||||||||||||||  g
 ggcgauuucu guac agaaaucgccgu  aaacg     uuugcag gau     gua uggaaaucgucgcgaa  u
c          a    c            ga     --gug       c   cuaua   c                ga 

Annotation confidence Not enough data

Genome context

chr2: 5712439-5712594 [-]

Mature gra-miR7492e

• Accession: MIMAT0034115
• Description: Gossypium raimondii gra-miR7492e mature miRNA
• Sequence: 11 - CCAUGAUCUUUAGCGGCGUUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629