Stem-loop gra-MIR7502c

Accession

MI0027609

Description

Gossypium raimondii gra-MIR7502c precursor miRNA

Sequence

uuaguucuuuUUGUUAAAAGUUUCAUCCAUUuuuuuaguuaaaaaauaguaacuguauguugacauaaaguacacauaacguaauaggugucacuauuuagcuauucuauaaaccauaucgauuuuuaaggguaaaaauaaaugaaauuuucaacaaaaaagaucagu
...(.((((((((((.((((((((((..((((((....(((((((((((...(((.(((.((((((....(((.......)))....)))))).))).))).....))))............)))))))....))))))..)))))))))).))).))))))).)...

Structure

uua u       -   A          CC      uuag       ------------    --uaa   u   u      aaag   ac 
   g ucuuuUU GUU AAAGUUUCAU  AUUuuu    uuaaaaa            auag     cug aug ugacau    uac  a
   | ||||||| ||| ||||||||||  ||||||    |||||||            ||||     ||| ||| ||||||    |||  u
   c agaaaaa caa uuuuaaagua  uaaaaa    aauuuuu            uauc     gau uau acugug    aug  a
uga u       a   c          aa      uggg       agcuauaccaaa    uuauc   u   c      gaua   ca 

Annotation confidence Not enough data

Genome context

chr5: 59731063-59731230 [-]

Mature gra-miR7502c

• Accession: MIMAT0034014
• Description: Gossypium raimondii gra-miR7502c mature miRNA
• Sequence: 11 - UUGUUAAAAGUUUCAUCCAUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629