Stem-loop gra-MIR8773

Accession

MI0027806

Description

Gossypium raimondii gra-MIR8773 precursor miRNA

Sequence

auuaaggggcUUGGAUGAACGGUGCGUUUACUUgugguuagcguaaaaacagcggugauggugggauuaaauauuguagcgacacuguagggugagauaaaaaaauaagcuaaacgcaccgcccgcccaaacccacccua
......(((.((((.((..((((((((((((((((..............(.((((((.((.((.(((.....))).)).)).)))))).)..............))))).)))))))))))..)).)))).)))......

Structure

auuaag   c    A  AA           -     gguuagcguaaaaa a      a  g  g   u 
      ggg UUGG UG  CGGUGCGUUUA CUUgu              c gcggug ug ug gau a
      ||| |||| ||  ||||||||||| |||||              | |||||| || || ||| a
      ccc aacc gc  gccacgcaaau gaaua              g ugucac gc au uua a
auccca   a    c  cc           c     aaaaaauagagugg a      a  g  g   u 

Annotation confidence Not enough data

Genome context

chr12: 34048888-34049027 [-]

Mature gra-miR8773

• Accession: MIMAT0034211
• Description: Gossypium raimondii gra-miR8773 mature miRNA
• Sequence: 11 - UUGGAUGAACGGUGCGUUUACUU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629