Stem-loop gra-MIR8659a

Accession

MI0027623

Description

Gossypium raimondii gra-MIR8659a precursor miRNA

Sequence

ggcacaugguAAUUUUUUAAGGUUGUUUGUGGAAuaaaauuuuuuuacuaccaauguaccaaauaguaacccuaaaauaaaauaugaguuaguauuugguacacugacagugcauuuuuuuauuccgcaagcagccucaaaaacuugccacgugucu
(((((.((((((.(((((.((((((((((((((((((((......((((..((.(((((((((((.((((.(.............).)))).))))))))))).))..)))).....)))))))))))))))))))).))))).)))))).))))).

Structure

-     a      U     A                    uuuuuu    ac  a           g    c uaaaa 
 ggcac ugguAA UUUUU AGGUUGUUUGUGGAAuaaaa      uacu  ca uguaccaaaua uaac c     u
 ||||| |||||| ||||| ||||||||||||||||||||      ||||  || ||||||||||| |||| |     a
 cugug accguu aaaaa uccgacgaacgccuuauuuu      guga  gu acaugguuuau auug g     a
u     c      c     c                    -uuuac    ca  c           g    a uauaa 

Annotation confidence Not enough data

Genome context

chr2: 60344590-60344746 [-]

Mature gra-miR8659a

• Accession: MIMAT0034028
• Description: Gossypium raimondii gra-miR8659a mature miRNA
• Sequence: 11 - AAUUUUUUAAGGUUGUUUGUGGAA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629