Stem-loop gra-MIR8774

Accession

MI0027807

Description

Gossypium raimondii gra-MIR8774 precursor miRNA

Sequence

acaaaacuguUUGGAUUUUGAUUCAUAGAUUCGUgauguucaaacuaucauuuuaauuauauuuaauuuggugaauuauuuuuauuacguuauuaaaaguuauuuauuaauuuguguaaauuauaauccaaguuaaaaaua
.........((((((((.((((((((((((..((((((.......))))))...(((((....)))))((((((((.(((((((.........))))))).)))))))))))))))..))))).)))))))).........

Structure

acaaaacug        U     --       --------------------------------------------------------UC      uu 
         uUUGGAUU UGAUU  CAUAGAU                                                          GUgaug  c
         |||||||| |||||  |||||||                                                          ||||||  a
         gaaccuaa auuaa  guguuua                                                          uacuau  a
auaaaaauu        u     au       auuauuuauugaaaauuauugcauuauuuuuauuaagugguuuaauuuauauuaauuu      ca 

Annotation confidence Not enough data

Genome context

chr5: 54903390-54903530 [+]

Mature gra-miR8774

• Accession: MIMAT0034212
• Description: Gossypium raimondii gra-miR8774 mature miRNA
• Sequence: 11 - UUGGAUUUUGAUUCAUAGAUUCGU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629