Stem-loop gra-MIR8661

Accession

MI0027626

Description

Gossypium raimondii gra-MIR8661 precursor miRNA

Sequence

agaucaugucCAUUACUUUUUCAUUCAUUAAuuucuaauuauauaagcauuaacauucaaauguguaauauugaauaguaauggauacaaaaguaauggaggggaacc
...((.(.((((((((((((..((((((((..(((..(((((....(((((........))))))))))...)))...))))))))..)))))))))))).).))...

Structure

aga  a g            UC        -Au   -ua     auaa     aac 
   uc u ucCAUUACUUUU  AUUCAUUA   uuc   auuau    gcauu   a
   || | ||||||||||||  ||||||||   |||   |||||    |||||    
   ag g agguaaugaaaa  uagguaau   aag   uaaug    uguaa   u
cca  g g            ca        gau   uua     ----     acu 

Annotation confidence Not enough data

Genome context

chr3: 304604-304711 [+]

Mature gra-miR8661

• Accession: MIMAT0034031
• Description: Gossypium raimondii gra-miR8661 mature miRNA
• Sequence: 11 - CAUUACUUUUUCAUUCAUUAA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629