Stem-loop gra-MIR8756

Accession

MI0027780

Description

Gossypium raimondii gra-MIR8756 precursor miRNA

Sequence

aaaaauuggcUGGACUGUUAAAAUUUUAAUGGCAuugauguggcaauucauaugaguacuuugacauggauaauuuuuucuuguaaauuuuuuuugaaauuuauugaauuuauuauuuuuuuaaaguauauguggauuaucaugugaguugccaaauuagugugguuaaaauuuuaacauuccaguuaaauuuuua
((((((((((((((.(((((((((((((((.((((((((.((((((((((((((((((((((((...(((((((...(((..(((((((((....))))))))).)))...)))))))..)))))))))..........))))))))))))))).)))))))).))))))))))))))).))))))).))))))).

Structure

-       -       C               G        g               ----------         cau       uuu   uu         u 
 aaaaauu ggcUGGA UGUUAAAAUUUUAAU GCAuugau uggcaauucauauga          guacuuuga   ggauaau   uuc  guaaauuuu u
 ||||||| ||||||| ||||||||||||||| |||||||| |||||||||||||||          |||||||||   |||||||   |||  |||||||||  
 uuuuuaa uugaccu acaauuuuaaaauug ugugauua accguugaguguacu          uaugaaauu   uuuauua   aag  uauuuaaag u
a       a       u               g        a               auuaggugua         -uu       uuu   -u         u 

Annotation confidence Not enough data

Genome context

chr11: 1644442-1644637 [+]

Mature gra-miR8756

• Accession: MIMAT0034185
• Description: Gossypium raimondii gra-miR8756 mature miRNA
• Sequence: 11 - UGGACUGUUAAAAUUUUAAUGGCA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629