Stem-loop gra-MIR7504n

Accession

MI0027667

Description

Gossypium raimondii gra-MIR7504n precursor miRNA

Sequence

caauaguuuuaugccauauuagcauuuucaucuugaauuucagcauuuucauccugaaaaaaauuaaauccaaauuaaaauccuuaaauucAGGAUAAAAUUACUGAUGUGGCAUaaaauuauua
.(((((((((((((((((((((.(((((.(((((((((((.((.(((((......((...........))......))))).)).))))))))))))))))..))))))))))))))))))))).

Structure

c                     -c     c           c  c     cauccu  aaaa 
 aauaguuuuaugccauauuag  auuuu aucuugaauuu ag auuuu      ga    a
 |||||||||||||||||||||  ||||| ||||||||||| || |||||      ||    a
 uuauuaaaaUACGGUGUAGUC  UAAAA UAGGAcuuaaa uc uaaaa      cu    u
a                     AU     -           u  c     uuaaac  aaau 

Annotation confidence Not enough data

Genome context

chr8: 21259891-21260015 [-]

Mature gra-miR7504n

• Accession: MIMAT0034072
• Description: Gossypium raimondii gra-miR7504n mature miRNA
• Sequence: 92 - AGGAUAAAAUUACUGAUGUGGCAU - 115
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629