Stem-loop gra-MIR8659b

Accession

MI0027624

Description

Gossypium raimondii gra-MIR8659b precursor miRNA

Sequence

agguuuuagacuccacaaacagaguuaaggaauugacaagugucaaaauauuuaaauauauauauuuuaaaaaaaaacacaugucAAUUUUUUAAGGUUGUUUGUGGAAuaagaaaauc
.((((((....(((((((((((..((((((((((((((.((((.......((((((.........)))))).....)))).))))))))))))))..))))))))))).....))))))

Structure

a      -agac           ag              a    caaaaua      uau 
 gguuuu     uccacaaacag  uuaaggaauugaca gugu       uuuaaa   a
 ||||||     |||||||||||  |||||||||||||| ||||       ||||||   u
 cuaaaa     AGGUGUUUGUU  AAUUUUUUAAcugu caca       aaauuu   a
-      gaauA           GG              a    --aaaaa      uau 

Annotation confidence Not enough data

Genome context

chr5: 40491855-40491973 [+]

Mature gra-miR8659b

• Accession: MIMAT0034029
• Description: Gossypium raimondii gra-miR8659b mature miRNA
• Sequence: 86 - AAUUUUUUAAGGUUGUUUGUGGAA - 109
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629