Stem-loop gra-MIR8716

Accession

MI0027701

Description

Gossypium raimondii gra-MIR8716 precursor miRNA

Sequence

uggugacauguuacuagccuaacauuuugacacguggaaaaaaguuaaaauauuuauaaaauauuuauaaaaauauucuAUGUGUCAAAAUGUGAGGCUGUCAcgugucacaa
..(((((((((.((.(((((.((((((((((((((((((.....(((((((((((...)))))))).))).....)))))))))))))))))).))))))).)))))))))..

Structure

ug         u  u     a                  aaaag   -        a 
  gugacaugu ac agccu acauuuugacacguggaa     uua aaauauuu  
  ||||||||| || ||||| ||||||||||||||||||     ||| |||||||| u
  cacugugcA UG UCGGA UGUAAAACUGUGUAucuu     aau uuuauaaa  
aa         C  -     G                  auaaa   a        a 

Annotation confidence Not enough data

Genome context

chr1: 5373782-5373894 [+]

Mature gra-miR8716

• Accession: MIMAT0034106
• Description: Gossypium raimondii gra-miR8716 mature miRNA
• Sequence: 80 - AUGUGUCAAAAUGUGAGGCUGUCA - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629