Accession
MI0027839
Description
Gossypium raimondii
gra-MIR8670a precursor miRNA
Sequence
184
reads,
42.0
reads per million, 11 experiments
caccgaagcuAAAGUUGGGCCCCUGUUGGUGCGGgagcgucgguaaaaaaguguccccauuucagacaucaacuguuuuaucccgacacuuuuuuuACCCGACGCUCCCGCACCAACAGGggcccaacuuuagcuucggugc
(((((((((((((((((((((((((((((((((((((((((((.(((((((((((........(((((.....)))))......)))))))))))...))))))))))))))))))))))))))))))))))))))))))).
(((((((((((((((((((((((((((((((((((((((((((.(((((((((((........(((((.....)))))......)))))))))))...))))))))))))))))))))))))))))))))))))))))))).
Structure
- --u cccauuuc u caccgaagcuAAAGUUGGGCCCCUGUUGGUGCGGgagcgucgg aaaaaaguguc agaca c ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| a guggcuucgauuucaacccggGGACAACCACGCCCUCGCAGCC uuuuuucacag uuugu a c CAu --cccuau c
Annotation confidence
Low
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Genome context
chr10: 9698287-9698428 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gra-MIR8670a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gra-miR8670a-5p
| Accession | MIMAT0034244 |
| Description | Gossypium raimondii gra-miR8670a-5p mature miRNA |
| Sequence | 11 - AAAGUUGGGCCCCUGUUGGUGCGG - 34 |
| Evidence |
experimental
Illumina [1] |
Mature gra-miR8670a-3p
| Accession | MIMAT0055540 |
| Description | Gossypium raimondii gra-miR8670a-3p mature miRNA |
| Sequence | 97 - ACCCGACGCUCCCGCACCAACAGG - 120 |
| Evidence |
experimental
unknown |
References
|
