Stem-loop gra-MIR7492d

Accession

MI0027611

Description

Gossypium raimondii gra-MIR7492d precursor miRNA

Gene family

MIPF0001661; MIR7492

Sequence

uuuucaaaaacgucgcuaaagcccugagcauuagcggcgcuuuuucaaaaacgccacuaaagccccgaaaggucagaaaacgacgccauUGGGCUUAGAUUUUUUGCGGCGUUuuuacgaaaa
.(((((((((((((((.((((..((((((.((((.((((.((((...)))))))).))))....((((..((((.......))).)..))))))))))..)))).)))))))))))..)))).

Structure

u    --           u    cc      auuagcggcgcuuuuucaaaaacgccacuaaagcc    aa -   ag 
 uuuc  aaaaacgucgc aaag  cugagc                                   ccga  g guc  a
 ||||  ||||||||||| ||||  ||||||                                   ||||  | |||  a
 aaag  uuuUUGCGGCG UUUU  GAUUCG                                   GGUu  c cag  a
a    ca           U    UA      -----------------------------------    ac g   ca 

Annotation confidence Not enough data

Genome context

chr12: 13510877-13510999 [-]

Mature gra-miR7492d

• Accession: MIMAT0034016
• Description: Gossypium raimondii gra-miR7492d mature miRNA
• Sequence: 90 - UGGGCUUAGAUUUUUUGCGGCGUU - 113
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629