Stem-loop gra-MIR8675a

Accession

MI0027641

Description

Gossypium raimondii gra-MIR8675a precursor miRNA

Gene family

MIPF0002106; MIR8675

Sequence

cgugacacuucgagauuauguuagaucauuacuuuaaaauuaaaagauauauaaauuuuAAGGUGAUGACCUGCUACAAUUUUagagugucau
.(((((((((.((((((.((.(((.((((((((((((((((............)))))))))))))))).))).)).)))))).)))))))))

Structure

c         c      a  u   a                aaaag 
 gugacacuu gagauu ug uag ucauuacuuuaaaauu     a
 ||||||||| |||||| || ||| ||||||||||||||||      
 uacugugag UUUUAA AU GUC AGUAGUGGAAuuuuaa     u
-         a      C  C   C                auaua 

Annotation confidence Not enough data

Genome context

chr5: 144576-144668 [-]

Mature gra-miR8675a

• Accession: MIMAT0034046
• Description: Gossypium raimondii gra-miR8675a mature miRNA
• Sequence: 60 - AAGGUGAUGACCUGCUACAAUUUU - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629