Stem-loop gra-MIR7484d

Accession

MI0027651

Description

Gossypium raimondii gra-MIR7484d precursor miRNA

Gene family

MIPF0001667; MIR7484

Sequence

gucaaaaauuucuuucacuucuauuauaaaaaacugguuugguugacggaauagucauauaccacguguaccucauguuaauguacaaagacuauuuuuuaacaauagaaauugaugaaauuuuuaauAGAAUGACCGGUUUGCUCUUUugaucuaacg
((((((((((((..(((.(((((((.(((((((.(((((((((((((......))))...)))(((((.....)))))..........)))))))))))))..)))))))..))).))))))))........)))).......................

Structure

-----------------------    --------        uu   -c       -a       c      -------------------------   ---    gg 
                       guca        aaaauuuc  uca  uucuauu  uaaaaaa ugguuu                         ggu   ugac  a
                       ||||        ||||||||  |||  |||||||  ||||||| ||||||                         |||   ||||   
                       CAGU        uuuuaaag  agu  aagauaa  auuuuuu aucaga                         cca   acug  a
gcaaucuaguUUUCUCGUUUGGC    AAGAuaau        -u   ua       ca       -      aacauguaauuguacuccaugugca   uau    au 

Annotation confidence Not enough data

Genome context

chr4: 60907343-60907501 [-]

Mature gra-miR7484d

• Accession: MIMAT0034056
• Description: Gossypium raimondii gra-miR7484d mature miRNA
• Sequence: 129 - AGAAUGACCGGUUUGCUCUUU - 149
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629