Stem-loop gra-MIR8700

Accession

MI0027676

Description

Gossypium raimondii gra-MIR8700 precursor miRNA

Sequence

aaguccuuuuAGGGCGACAACGGUUACUGUGAUUaaagaacucauuaauaacuacaauuguugucgcccugacucgaguuu
((.((...(((((((((((((((((...((.(((((........))))).))...)))))))))))))))))...)).)).

Structure

-  g  cuu                 ACU  G     aga 
 aa uc   uuAGGGCGACAACGGUU   GU AUUaa   a
 || ||   |||||||||||||||||   || |||||    
 uu ag   agucccgcuguuguuaa   ca uaauu   c
u  g  cuc                 cau  a     acu 

Annotation confidence Not enough data

Genome context

chr6: 40100451-40100531 [-]

Mature gra-miR8700

• Accession: MIMAT0034081
• Description: Gossypium raimondii gra-miR8700 mature miRNA
• Sequence: 11 - AGGGCGACAACGGUUACUGUGAUU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629