Stem-loop gra-MIR8675b

Accession

MI0027679

Description

Gossypium raimondii gra-MIR8675b precursor miRNA

Gene family

MIPF0002106; MIR8675

Sequence

uuugguauuaugauauugugccacaucaucacuuaaaaguuuaaaauuuuauauaaauuuucAGGUGAUGAUGUGGUACAAUCUCAaagugucaca
..(((((((.(((.((((((((((((((((((((.((((((((..........)))))))).)))))))))))))))))))).))).)))))))..

Structure

uu       a   u                    a        aaau 
  ugguauu uga auugugccacaucaucacuu aaaguuua    u
  ||||||| ||| |||||||||||||||||||| ||||||||     
  acuguga ACU UAACAUGGUGUAGUAGUGGA uuuuaaau    u
ac       a   C                    c        auau 

Annotation confidence Not enough data

Genome context

chr2: 51421256-51421351 [+]

Mature gra-miR8675b

• Accession: MIMAT0034084
• Description: Gossypium raimondii gra-miR8675b mature miRNA
• Sequence: 63 - AGGUGAUGAUGUGGUACAAUCUCA - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629