Stem-loop gra-MIR8715

Accession

MI0027700

Description

Gossypium raimondii gra-MIR8715 precursor miRNA

Sequence

ugaaauugacAUGGGCUGGCACAUGGGCGUGUGGccagcccguguggcucacaugguuguguguccagcccguguggauccug
....(((.((((((((((((((((((.((((((((((.......)))).)))))).))))))).))))))))))).)))....

Structure

ugaa   g           -       G      -    gc 
    auu acAUGGGCUGG CACAUGG CGUGUG Gcca  c
    ||| ||||||||||| ||||||| |||||| ||||  c
    uag ugugcccgacc guguguu guacac cggu  g
gucc   g           u       g      u    gu 

Annotation confidence Not enough data

Genome context

chr12: 5487096-5487178 [+]

Mature gra-miR8715

• Accession: MIMAT0034105
• Description: Gossypium raimondii gra-miR8715 mature miRNA
• Sequence: 11 - AUGGGCUGGCACAUGGGCGUGUGG - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629