Stem-loop gra-MIR7486j

Accession

MI0027705

Description

Gossypium raimondii gra-MIR7486j precursor miRNA

Gene family

MIPF0001682; MIR7486

Sequence

aucgcguucaCAUCAGCGCGAUGUCAGGGGACGUgucagcaaaucgcguccacaucagcgcgcuuugcuuauguggacacaaaucgcaccuacgaggaugcgguuuucugacacguccccagacaucgcgcugacguggacgcgauu
(((((((((((.(((((((((((((.(((((((((((((.(((((((((((((((.((((.....)))).)))))))).....(((......)))....))))))).))))))))))))).))))))))))))).))))))))))).

Structure

-           A             A             c       ---------------------        c    c 
 aucgcguucaC UCAGCGCGAUGUC GGGGACGUgucag aaaucgc                     guccacau agcg g
 ||||||||||| ||||||||||||| ||||||||||||| |||||||                     |||||||| |||| c
 uagcgcaggug agucgcgcuacag ccccugcacaguc uuuggcg                     caggugua ucgu u
u           c             a             u       uaggagcauccacgcuaaaca        u    u 

Annotation confidence Not enough data

Genome context

chr9: 68902323-68902469 [-]

Mature gra-miR7486j

• Accession: MIMAT0034110
• Description: Gossypium raimondii gra-miR7486j mature miRNA
• Sequence: 11 - CAUCAGCGCGAUGUCAGGGGACGU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629