Stem-loop gra-MIR8730

Accession

MI0027725

Description

Gossypium raimondii gra-MIR8730 precursor miRNA

Sequence

uugaaugagaCUAAGAGAUUGGGAUUUGGUAGGAugauauugaagaaccuaauuuaacguaucaaauuacgacaaaccacuaucaaauuacgucaucuuuaucccuuuuuaaugagaggaugacaaaucaaauuuuuccuccuaaauuuuaguacuuuuagcuggauuugaa
((((((.((.(((((((((((((((((((.((((.((..((((..............((((......))))....................(((((((((...............)))))))))...))))..)).)))).)))))))))))).)))))))))..)))))).

Structure

-      -g  a       -            U    u  ua    agaaccuaauuuaacguaucaaauuacgacaaaccacuaucaaauuac         aucccu 
 uugaau  ag CUAAGAG AUUGGGAUUUGG AGGA ga  uuga                                                gucaucuuu      u
 ||||||  || ||||||| |||||||||||| |||| ||  ||||                                                |||||||||      u
 aguuua  uc gauuuuc ugauuuuaaauc uccu uu  aacu                                                caguaggag      u
a      gg  -       a            c    u  ua    ---------------------------------------------aaa         aguaau 

Annotation confidence Not enough data

Genome context

chr12: 32606707-32606878 [-]

Mature gra-miR8730

• Accession: MIMAT0034130
• Description: Gossypium raimondii gra-miR8730 mature miRNA
• Sequence: 11 - CUAAGAGAUUGGGAUUUGGUAGGA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629