Stem-loop gra-MIR7492m

Accession

MI0027728

Description

Gossypium raimondii gra-MIR7492m precursor miRNA

Gene family

MIPF0001661; MIR7492

Sequence

acaaaugacgCUAUAGAACAUGACCUUUAGCAGCauguuuuguaaaaagcacugcuaaagaacaugaccuuuaggggagcaguacuuuccccacagacgccacuaaagaacaugacauuuagcgacgcuuuuaccaaaaccgccgcuaaaggucauguucuuuagcggcauuuuu
..(((((.(((((.(((((((((((((((((.((..((((((..((((((..(((((((...((((..(((((((((((.......))))))...........)))))..))))...)))))))..))))))..)))))).)).))))))))))))))))).))))).)))))..

Structure

ac     a     U                 A  au      ua      ac       gaa    ac     -----------      ca 
  aaaug cgCUA AGAACAUGACCUUUAGC GC  guuuug  aaaagc  ugcuaaa   caug  cuuua           ggggag  g
  ||||| ||||| ||||||||||||||||| ||  ||||||  ||||||  |||||||   ||||  |||||           ||||||  u
  uuuac gcgau ucuuguacuggaaaucg cg  caaaac  uuuucg  gcgauuu   guac  gaaau           ccccuu  a
uu     g     u                 c  -c      ca      ca       aca    aa     caccgcagaca      uc 

Annotation confidence Not enough data

Genome context

chr5: 10474072-10474246 [+]

Mature gra-miR7492m

• Accession: MIMAT0034133
• Description: Gossypium raimondii gra-miR7492m mature miRNA
• Sequence: 11 - CUAUAGAACAUGACCUUUAGCAGC - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629