Stem-loop gra-MIR8734

Accession

MI0027734

Description

Gossypium raimondii gra-MIR8734 precursor miRNA

Sequence

ucuaguagauuacugaugucuuagugucgagaauugaauauuugaagagaauuuaaaacacgaucccuuuuuguauuaggacauuacuuaacuaaauuaguuuucacgaagagagcuuauuucaaguuaauugagaagaaauGAUCAUAUCUCGUACGUUAGGACAuacugccuua
..(((((...)))))(((((((((((((((((..(((.(((((......................(((.........)))...(((.((((((((((.(((((((.....))))))).))))..)))))).)))....))))).)))..))))).)))))))))))).........

Structure

ucuaguagauuacug            -     au   a     gaagagaauuuaaaacacgaucccuuuuuguauuaggaca   c      --    u       a 
               augucuuagugu cgaga  uga uauuu                                        uua uuaacu  aaau aguuuuc c
               |||||||||||| |||||  ||| |||||                                        ||| ||||||  |||| ||||||| g
               uACAGGAUUGCA GCUCU  ACU Guaaa                                        agu aauuga  uuua ucgagag a
------auuccguca            U     AU   A     ------------------------------------gaag   u      ac    u       a 

Annotation confidence Not enough data

Genome context

chr11: 55070142-55070317 [-]

Mature gra-miR8734

• Accession: MIMAT0034139
• Description: Gossypium raimondii gra-miR8734 mature miRNA
• Sequence: 143 - GAUCAUAUCUCGUACGUUAGGACA - 166
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629