Stem-loop gra-MIR8751a

Accession

MI0027772

Description

Gossypium raimondii gra-MIR8751a precursor miRNA

Sequence

uagugaggguUGAAAUUUGUAGAGACAAAACGCUccaaguaugacgcacuucagcagagguacugaaagugcucccagcugaguuagcauugaaaacgcuuucaacuggacacgcucucaauacuucugaugacagugccucuugcuuggagcauuuugucucugcaaauuucaaccccccacuau
(((((.((((((((((((((((((((((((.((((((((((.((.((((((((.((((((((.(((.((((...((((.((((..(((.........))))))).))))...)))).))).)))))))).))).))))).)).)))))))))).))))))))))))))))))))))))..))))).

Structure

-     -a                        C          u  c     -   g        c   a    cuc    c    uu   auu 
 uagug  ggguUGAAAUUUGUAGAGACAAAA GCUccaagua ga gcacu uca cagaggua uga agug   ccag ugag  agc   g
 |||||  |||||||||||||||||||||||| |||||||||| || ||||| ||| |||||||| ||| ||||   |||| ||||  |||   a
 aucac  cccaacuuuaaacgucucuguuuu cgagguucgu cu cguga agu gucuucau acu ucgc   gguc acuu  ucg   a
u     cc                        a          u  c     c   a        a   c    aca    a    --   caa 

Annotation confidence Not enough data

Genome context

chr5: 49774436-49774621 [-]

Mature gra-miR8751a

• Accession: MIMAT0034177
• Description: Gossypium raimondii gra-miR8751a mature miRNA
• Sequence: 11 - UGAAAUUUGUAGAGACAAAACGCU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629