Stem-loop gra-MIR8761

Accession

MI0027786

Description

Gossypium raimondii gra-MIR8761 precursor miRNA

Sequence

uuuaaaacuuUGUUGACGUUGCAUACAUGUGGAUagcaugucaauauuuacuuaauuuuuaaaauuuuaaaauuaaaaaaauuauaaaaacuuuuuaaaaauuaaaaaacauuaaaauuuuaaaaaauauauuuuaaaaauuuuaaaaaguaaauuaaauuuugacaugucaucuagguggcaauccauguauaugccacgucagcaaaguaaacga
......(((((((((((((.((((((((.(((((.(((((((((.(((((.((((((((((((((((((.((((.....)))).)))))...)))))))))))))......((((((((((.((((.....)))).)))))))))).........))))).))))))))).))))).)))(((.....))).))))).)))))))))))))......

Structure

uuuaaa             U     ------------   G     a         u     -------------------------------------------------c             ---     a    a 
      acuuUGUUGACGU GCAUA            CAU UGGAU gcaugucaa auuua                                                  uuaauuuuuaaaa   uuuua aauu a
      ||||||||||||| |||||            ||| ||||| ||||||||| |||||                                                  |||||||||||||   ||||| |||| a
      ugaaacgacugca cguau            gug aucua uguacaguu uaaau                                                  aauuaaaaauuuu   aaaau uuaa a
agcaaa             c     auguaccuaacg   g     c         u     uaaaugaaaaauuuuaaaaauuuuauauaaaaaauuuuaaaauuacaaaa             uca     a    a 

Annotation confidence Not enough data

Genome context

chr3: 9712218-9712434 [+]

Mature gra-miR8761

• Accession: MIMAT0034191
• Description: Gossypium raimondii gra-miR8761 mature miRNA
• Sequence: 11 - UGUUGACGUUGCAUACAUGUGGAU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629